Pre_GI Gene

Host: NC_016810:3028421 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016810:3028421 Salmonella enterica subsp. enterica serovar Typhimurium str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30284213028765345hypothetical proteinBLASTP
30289473029864918Iron transport protein periplasmic-binding proteinQuickGO ontologyBLASTP
30298613030682822Iron transport protein ATP-binding componentQuickGO ontologyBLASTP
30306793031539861Iron transport protein inner membrane componentQuickGO ontologyBLASTP
30315303032378849Iron transport protein inner membrane componentQuickGO ontologyBLASTP
30324773033382906Avirulence determinant of plant pathogenic bacteriaQuickGO ontologyBLASTP
30335433034298756AraC family transcriptional regulatorQuickGO ontologyBLASTP
30346833035570888AraC family transcriptional regulatorQuickGO ontologyBLASTP
30359153036367453hypothetical proteinBLASTP
30363643037044681oxygen-regulated invasion proteinQuickGO ontologyBLASTP
30370013037600600oxygen-regulated invasion proteinQuickGO ontologyBLASTP
30375723038330759type III secretion system apparatusQuickGO ontologyBLASTP
30383273038632306type III secretion system apparatusQuickGO ontologyBLASTP
30386513038893243type III secretion system apparatusQuickGO ontologyBLASTP
303891830400961179type III secretion apparatus componentQuickGO ontologyBLASTP
30404123041341930AraC family transcriptional regulatorQuickGO ontologyBLASTP
304243230440931662invasion protein regulatorQuickGO ontologyBLASTP
30441113044593483cell invasion proteinQuickGO ontologyBLASTP
304464730462781632tyrosine phosphatase associated with virulenceQuickGO ontologyBLASTP
30462653046657393chaperone associated with virulenceQuickGO ontologyBLASTP
30469883047236249acyl carrier proteinQuickGO ontologyBLASTP
304725530493122058pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
304933130503621032pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
305043330516621230pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
305169030534711782pathogenicity island 1 effector proteinQuickGO ontologyBLASTP
30534743053971498type III secretion-associated chaperoneQuickGO ontologyBLASTP
305410930551791071type III secretion system secretory apparatusQuickGO ontologyBLASTP
30551663055957792type III secretion system secretory apparatusQuickGO ontologyBLASTP
30559613056221261type III secretion system secretory apparatusQuickGO ontologyBLASTP
30562473056921675type III secretion system secretory apparatusQuickGO ontologyBLASTP
30569113057822912surface presentation of antigens protein associated with type III secretion and virulenceQuickGO ontologyBLASTP
305782230588321011surface presentation of antigens protein associated with type III secretion and virulenceQuickGO ontologyBLASTP
30588323059275444type III secretion system secretory apparatusQuickGO ontologyBLASTP
305925330605481296secretory apparatus ATP synthase associated with virulenceQuickGO ontologyBLASTP
30605453060952408chaperone protein for type III secretion system effectorsQuickGO ontologyBLASTP
306097630630332058secretory apparatus of type III secretion systemQuickGO ontologyBLASTP
306305830641761119cell invasion proteinQuickGO ontologyBLASTP
306417330658611689type III secretion system secretory apparatusQuickGO ontologyBLASTP
30658583066508651AraC family regulatory proteinQuickGO ontologyBLASTP
30669653067408444outer membrane lipoproteinQuickGO ontologyBLASTP
30678393068288450pathogenicity island 1 proteinQuickGO ontologyBLASTP
30682733068620348pathogenicity island 1 proteinQuickGO ontologyBLASTP
30688933069219327pathogenicity island 1 proteinQuickGO ontologyBLASTP
30694603069567108pathogenicity island 1 proteinQuickGO ontology
30699083070198291pathogenicity island 1 proteinQuickGO ontologyBLASTP
30701953070722528pathogenicity island 1 proteinQuickGO ontologyBLASTP
30713473072003657serinethreonine protein phosphataseQuickGO ontologyBLASTP
30721753072696522hypothetical proteinBLASTP
307289730754222526DNA mismatch repair proteinQuickGO ontologyBLASTP
30754783075858381hypothetical proteinBLASTP
307585530770631209membrane transport proteinQuickGO ontologyBLASTP
30771513078083933LysR family transcriptional regulatorQuickGO ontologyBLASTP
307812530796211497permeaseQuickGO ontologyBLASTP
30796183080568951hypothetical proteinBLASTP
30806083081369762putative hydroxypyruvate isomeraseQuickGO ontologyBLASTP
30813743082012639sugar aldolaseQuickGO ontologyBLASTP
308200930832711263hypothetical proteinBLASTP
30832653084188924hypothetical proteinBLASTP