Pre_GI Gene

Host: NC_016830:3697173 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:3697173 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36965803697176597twin-arginine translocation pathway signalQuickGO ontologyBLASTP
36971733698162990aldo-keto reductaseQuickGO ontologyBLASTP
369849037003491860Multidrug resistance ABC transporter ATP-binding and permease proteinQuickGO ontologyBLASTP
37004383701397960hypothetical proteinBLASTP
37015113702395885Regulatory protein LysRLysR substrate-binding proteinQuickGO ontologyBLASTP
37025103703439930N-acetyl-gamma-glutamyl-phosphate reductaseQuickGO ontologyBLASTP
37034683703962495LuxR family transcriptional regulatorQuickGO ontologyBLASTP
370439837055011104periplasmic spermidine putrescine-binding proteinQuickGO ontologyBLASTP
370559437069221329protein VgrG2dQuickGO ontologyBLASTP
37071903707651462GNAT family acetyltransferaseQuickGO ontologyBLASTP
370783837088391002LysR family transcriptional regulatorQuickGO ontologyBLASTP
37088973709544648Isochorismatase familyQuickGO ontologyBLASTP
37096333709797165transcriptional regulatorQuickGO ontology
37099133710611699carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
37107363711038303transposase is3 is911 family proteinQuickGO ontologyBLASTP
37116983711871174transposase subunit bQuickGO ontologyBLASTP
371229237146822391ferrichrome-iron receptorQuickGO ontologyBLASTP
37148013715781981Fe2-dicitrate sensor membrane proteinQuickGO ontologyBLASTP
37157683716166399ECF subfamily RNA polymerase sigma-70 factorQuickGO ontologyBLASTP
37169923717528537dihydrofolate reductaseQuickGO ontologyBLASTP
371766837189961329serine proteaseQuickGO ontology
371920937209751767Subtilisin-like serine proteaseQuickGO ontologyBLASTP
37212353721861627cbs domain-containing proteinQuickGO ontologyBLASTP
37219163722077162hypothetical protein
37221133722673561hypothetical protein
372331737243451029Dienelactone hydrolase-related enzymeQuickGO ontologyBLASTP
37243713724712342hypothetical proteinBLASTP
37249433725836894LysR family transcriptional regulatorQuickGO ontologyBLASTP
372660737292972691yd repeat-containing proteinQuickGO ontologyBLASTP
372931537307991485yd repeat-containing proteinQuickGO ontologyBLASTP
37312513731733483NAD-dependent formate dehydrogenase gamma subunitQuickGO ontologyBLASTP
373172737332861560NAD-dependent formate dehydrogenase subunit betaQuickGO ontologyBLASTP
373328337361592877NAD-dependent formate dehydrogenase subunit alphaQuickGO ontologyBLASTP
37361563736377222NAD-dependent formate dehydrogenase subunit deltaQuickGO ontologyBLASTP
373680737381471341hypothetical protein
37382473738762516nematocidal proteinQuickGO ontologyBLASTP
37390723739350279isochorismate pyruvate-lyaseQuickGO ontologyBLASTP
37394443739962519nicotinamidaseisochorismatase family proteinQuickGO ontologyBLASTP
37403863740667282hypothetical protein
37412153742141927transcriptional regulatorQuickGO ontologyBLASTP
37422483742856609protein LysEYggAQuickGO ontologyBLASTP