Pre_GI Gene

Host: NC_016830:3869572 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:3869572 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38695723870006435gcn5-related n-acetyltransferaseQuickGO ontologyBLASTP
38701903870774585protein GacAQuickGO ontologyBLASTP
387077738726001824excinuclease ABC subunit CQuickGO ontologyBLASTP
38726333873193561CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
3873257387332973tRNA-GlyQuickGO ontology
387355538753961842integrase family proteinQuickGO ontologyBLASTP
38754883875652165phage proteinQuickGO ontologyBLASTP
38763313876978648Gifsy-2 prophage proteinQuickGO ontologyBLASTP
38772223877647426protein UmuDQuickGO ontologyBLASTP
387764038789171278protein UmuCQuickGO ontologyBLASTP
388332638850501725relaxaseQuickGO ontologyBLASTP
38852703885467198hypothetical proteinBLASTP
38855983886557960dna primaseQuickGO ontologyBLASTP
38866883887017330hypothetical proteinBLASTP
388786138894021542hypothetical proteinBLASTP
38894133889667255hypothetical proteinBLASTP
388972538911071383hypothetical proteinBLASTP
38911043891979876hypothetical proteinBLASTP
38921663892420255transcriptional xre familyQuickGO ontologyBLASTP
38926713892844174hypothetical proteinBLASTP
389347638945521077hypothetical proteinBLASTP
389454938972872739multidrug ABC transporter permeaseQuickGO ontologyBLASTP
389728838984031116multidrug ABC transporter permeaseQuickGO ontologyBLASTP
38985073898764258acetate kinaseQuickGO ontologyBLASTP
38987653898947183acetate kinaseQuickGO ontologyBLASTP
390016239020991938rossmann fold nucleotide-binding domain-containing proteinQuickGO ontologyBLASTP
390209639030971002hypothetical proteinBLASTP
390324039042771038Threonine dehydrogenase-related Zn-dependent dehydrogenaseQuickGO ontologyBLASTP
390488339063701488hypothetical proteinBLASTP
39064973906712216putative lipoproteinQuickGO ontologyBLASTP
390685739085541698sulfate-transport transmembrane protein abc transporterQuickGO ontologyBLASTP
39089013909173273hypothetical proteinBLASTP
39093213909575255protein HupBQuickGO ontologyBLASTP
390970239123592658protein VirB4QuickGO ontologyBLASTP
39124523912829378signal recognition particle gtpaseQuickGO ontologyBLASTP
391283139143481518hypothetical proteinBLASTP
39143383915150813hypothetical proteinBLASTP
39151473915788642hypothetical proteinBLASTP
39157853916198414hypothetical proteinBLASTP
39162063916577372integrating conjugative element membrane proteinQuickGO ontologyBLASTP
39165953916834240hypothetical protein
39168313917163333hypothetical proteinBLASTP
391755539189911437hypothetical protein
39199473920381435hypothetical proteinBLASTP
392043439220291596transposase orf3QuickGO ontologyBLASTP
39220643922360297ISPpu14 transposase Orf2QuickGO ontologyBLASTP
39223653922730366transposase is3 is911 family proteinQuickGO ontologyBLASTP
39228053923116312hypothetical proteinBLASTP
392320339253082106protein VirD4QuickGO ontologyBLASTP
39253183925527210hypothetical proteinBLASTP
39258303926225396Soluble lytic murein transglycosylase subunitQuickGO ontologyBLASTP
39263603927079720hypothetical proteinBLASTP
39270893927760672methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
39277573928299543hypothetical proteinBLASTP
39284063929152747hypothetical proteinBLASTP
39292063929700495protein RadCQuickGO ontologyBLASTP
39301283930709582hypothetical proteinBLASTP
39315773931834258XRE family transcriptional regulatorQuickGO ontologyBLASTP
39321273932384258hypothetical protein
393242439343941971protein TopBQuickGO ontologyBLASTP
39346183935088471Single-stranded DNA-binding protein in PFGI-1-like clusterQuickGO ontologyBLASTP
39350913935414324integrase regulator RQuickGO ontologyBLASTP
39356003936355756hypothetical proteinBLASTP
393650039376871188hypothetical proteinBLASTP
39376843938232549hypothetical proteinBLASTP
393822939398001572protein with ParB-like nuclease domain in PFGI-1-like clusterQuickGO ontologyBLASTP
39402073940377171transcriptional regulator in PFGI-1-like clusterQuickGO ontologyBLASTP
39405473940993447receptor protein-tyrosine kinaseQuickGO ontologyBLASTP
39418743942548675TetR family transcriptional regulatorQuickGO ontologyBLASTP
394254139433928523-hydroxybutyryl-CoA dehydrogenaseQuickGO ontologyBLASTP
3943406394459011853-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
394471839457341017araC family transcriptional regulatorQuickGO ontologyBLASTP
394592439475761653histidine kinase HAMP regionBacterial chemotaxis sensory transducer precursorQuickGO ontologyBLASTP
39476293947958330putative MarR family transcriptional regulatorQuickGO ontologyBLASTP
39481523948709558protein FolE1QuickGO ontologyBLASTP
394881039523733564indolepyruvate ferredoxin oxidoreductase alpha and beta subunitsQuickGO ontologyBLASTP