Pre_GI Gene

Host: NC_016842:748419 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016842:748419 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7484197495521134octaprenyl-diphosphate synthaseQuickGO ontologyBLASTP
749455749700246hypothetical proteinBLASTP
7498457510561212galactose ABC superfamily ATP binding cassette transporter binding proteinQuickGO ontologyBLASTP
7511767526661491galactose ABC superfamily ATP binding cassette transporter ABC proteinQuickGO ontologyBLASTP
7526817542761596galactose ABC superfamily ATP binding cassette transporter membrane proteinQuickGO ontologyBLASTP
7544047564642061DNA helicase RecGQuickGO ontologyBLASTP
7565207575331014muramoyltetrapeptide carboxypeptidaseQuickGO ontologyBLASTP
7575347589161383GTP-binding proteinQuickGO ontologyBLASTP
758952759533582lipoproteinQuickGO ontologyBLASTP
759526760284759segregation and condensation protein ScpAQuickGO ontologyBLASTP
7603127615351224recombination protein AQuickGO ontologyBLASTP
7617967631181323lipoproteinQuickGO ontologyBLASTP
7632787639556785-formyltetrahydrofolate cyclo-ligaseQuickGO ontologyBLASTP
7640437658361794biotin carboxylaseQuickGO ontologyBLASTP
765824766660837putative nicotinamidaseQuickGO ontologyBLASTP
766722767357636hypothetical proteinBLASTP
767361767906546hypothetical proteinBLASTP
768019768411393hypothetical proteinBLASTP
768549768752204putative DNA-directed RNA polymerase subunit omegaQuickGO ontologyBLASTP