Pre_GI Gene

Host: NC_017215:22616 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017215:22616 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2184922691843Hydrolase acting on acid anhydrides in phosphorous-containing anhydridesQuickGO ontologyBLASTP
2261623218603Hydrolase acting on acid anhydrides in phosphorous-containing anhydridesQuickGO ontologyBLASTP
2320223528327Alphabeta hydrolaseQuickGO ontologyBLASTP
23567260682502excinuclease ABC subunit AQuickGO ontologyBLASTP
2632827182855MethyltransferaseQuickGO ontologyBLASTP
2723128145915membrane associated proteinQuickGO ontologyBLASTP
2846829067600Oxidoreductase acting on the CH-OH group of donors with NAD or NADP as acceptorQuickGO ontologyBLASTP
2927029983714membrane associated proteinQuickGO ontologyBLASTP
30056310901035cytosolic proteinQuickGO ontologyBLASTP
3112531400276hypothetical proteinBLASTP
3158431853270hypothetical proteinBLASTP
3199132395405Pyrophosphohydrolase MazG familyQuickGO ontologyBLASTP
3234232692351hypothetical proteinBLASTP
32702337841083TransporterQuickGO ontologyBLASTP
3391934128210hypothetical proteinBLASTP
34449359901542DNA cytosine-5--methyltransferaseQuickGO ontologyBLASTP
3608537038954hypothetical proteinBLASTP
3715837355198hypothetical proteinBLASTP
37447399212475membrane associated proteinQuickGO ontologyBLASTP
3994940569621hypothetical proteinBLASTP
40511426462136cytosolic proteinQuickGO ontologyBLASTP
42673441151443hypothetical proteinBLASTP
4429044493204hypothetical proteinBLASTP
4475744987231YafQQuickGO ontologyBLASTP
4505845207150hypothetical proteinBLASTP
4527445888615PemK-like proteinQuickGO ontologyBLASTP
46076470771002LysR family transcriptional regulatorQuickGO ontologyBLASTP
4696347394432hypothetical proteinBLASTP
472764797169625-didehydrogluconate reductaseQuickGO ontologyBLASTP
48063504472385Beta-glucosidaseQuickGO ontologyBLASTP
5052650972447Kanamycin kinaseQuickGO ontologyBLASTP
5106951338270Kanamycin kinaseQuickGO ontologyBLASTP
5151452008495hypothetical proteinBLASTP
52338536811344transposaseQuickGO ontologyBLASTP