Pre_GI Gene

Host: NC_017249:8283701 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:8283701 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
828266782837041038RhcU proteinQuickGO ontologyBLASTP
82837018284522822RhcT proteinQuickGO ontologyBLASTP
82845338284808276RhcS proteinQuickGO ontologyBLASTP
82848118285476666RhcR proteinQuickGO ontologyBLASTP
828546982865901122RhcQ proteinQuickGO ontologyBLASTP
82865878287123537hypothetical proteinBLASTP
828709982884541356RhcN proteinQuickGO ontologyBLASTP
82884518289071621nodulation proteinQuickGO ontologyBLASTP
82890688289706639nodulation proteinQuickGO ontologyBLASTP
82897188290581864RhcJ proteinQuickGO ontologyBLASTP
82905908290895306nodulation proteinQuickGO ontologyBLASTP
82915048291965462RhcC1 proteinQuickGO ontologyBLASTP
82922468292749504hypothetical protein
82926958292928234hypothetical protein
82931158293318204hypothetical proteinBLASTP
82938898294836948transposaseQuickGO ontologyBLASTP
829510882965621455hypothetical proteinBLASTP
82968138297373561hypothetical proteinBLASTP
82974718297779309hypothetical proteinBLASTP
82978228298013192hypothetical proteinBLASTP
82981308299023894hypothetical proteinBLASTP
82990578299593537hypothetical proteinBLASTP
82995968300024429hypothetical proteinBLASTP
830003483021332100RhcV proteinQuickGO ontologyBLASTP
83021648302754591hypothetical proteinBLASTP
83028798303301423hypothetical proteinBLASTP
83033228303744423hypothetical proteinBLASTP
83037198304171453hypothetical proteinBLASTP
830485983062051347hypothetical proteinBLASTP
83063618306924564hypothetical proteinBLASTP
83068368307648813hypothetical proteinBLASTP
83081848308933750hypothetical proteinBLASTP
83089888309707720hypothetical proteinBLASTP
83098668310315450hypothetical proteinBLASTP
83102548310592339hypothetical proteinBLASTP
83107828311171390hypothetical proteinBLASTP
83122768312578303hypothetical proteinBLASTP
83130538313442390hypothetical proteinBLASTP
831462483157331110hypothetical proteinBLASTP
831579083170581269transposaseQuickGO ontologyBLASTP
83171798318135957hypothetical proteinBLASTP
83180878318641555alkyl hydroperoxide reductaseQuickGO ontologyBLASTP
83186488319196549alkyl hydroperoxide reductaseQuickGO ontologyBLASTP
83194088319704297hypothetical proteinBLASTP
831974383210501308flavoproteinQuickGO ontologyBLASTP
832106283221711110electron transfer flavoprotein subunit alphaQuickGO ontologyBLASTP
83227778322986210hypothetical proteinBLASTP
83231228323463342nitrogenase stabilizingprotective proteinQuickGO ontologyBLASTP
83241188324894777molybdenum processing proteinQuickGO ontologyBLASTP
83250418325925885dinitrogenase reductase proteinQuickGO ontologyBLASTP
83261078326316210hypothetical proteinBLASTP
83266438326918276hypothetical proteinBLASTP
83271408327871732outer membrane proteinQuickGO ontologyBLASTP
83282778328624348ferredoxinQuickGO ontologyBLASTP
83287758329071297hypothetical proteinBLASTP
83293448329688345hypothetical proteinBLASTP
83297228330081360hypothetical protein
83300208330337318hypothetical protein
83303348330648315iron-sulfur cofactor synthesis proteinQuickGO ontologyBLASTP
83308998331189291hypothetical proteinBLASTP
833113483327171584FeMo cofactor biosynthesis proteinQuickGO ontologyBLASTP