Pre_GI Gene

Host: NC_017249:908500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:908500 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9085689096681101DNA-damage-inducible proteinQuickGO ontologyBLASTP
909712910155444hypothetical proteinBLASTP
910250910459210hypothetical protein
910496911428933hypothetical proteinBLASTP
9120779133451269hypothetical proteinBLASTP
913440914282843hypothetical protein
914415914669255hypothetical protein
914631914942312hypothetical protein
914942915223282hypothetical proteinBLASTP
9152209167911572hypothetical proteinBLASTP
916766917437672hypothetical protein
917988918152165hypothetical protein
9187279198781152hypothetical proteinBLASTP
920106920375270hypothetical protein
920362921309948transposaseQuickGO ontologyBLASTP
921469921624156hypothetical protein
922425922721297hypothetical protein
922914923492579hypothetical proteinBLASTP
923560924168609hypothetical proteinBLASTP
924186924332147hypothetical protein
924342924644303hypothetical protein
924884925144261hypothetical proteinBLASTP
926584926811228hypothetical protein
927630927893264hypothetical proteinBLASTP
9299229312591338hypothetical proteinBLASTP
931514932359846hypothetical protein
932363933208846hypothetical proteinBLASTP
933468934274807hypothetical proteinBLASTP
936392936622231hypothetical protein
93794193801777tRNA-ArgQuickGO ontologyBLASTP
9380779391261050hypothetical proteinBLASTP
9391289422383111hypothetical proteinBLASTP
9424139434951083ABC transporter permeaseQuickGO ontologyBLASTP
9434959445051011ABC transporter permeaseQuickGO ontologyBLASTP
944502945224723ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
945221945985765ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
9461479473311185ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
9476779491191443transcriptional regulatorQuickGO ontologyBLASTP