Pre_GI Gene

Host: NC_017271 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017271:2789667 Xanthomonas campestris pv. raphani 756C chromosome, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
278966727914061740pts system fructose-specific eiibc component eiibc-fruQuickGO ontologyBLASTP
27914612791607147hypothetical protein
279157827928551278carbohydrate-selective porin OprBQuickGO ontologyBLASTP
27930952793745651hypothetical proteinBLASTP
279378627978504065hypothetical proteinBLASTP
27978872798138252hypothetical proteinBLASTP
27985752799141567large Ala-Gln-rich proteinQuickGO ontologyBLASTP
28032952803435141hypothetical protein
28038712804095225integraseQuickGO ontologyBLASTP
28041972805165969protein-export membrane protein SecFQuickGO ontologyBLASTP
28051802805293114hypothetical protein
280527428071421869protein-export membrane protein SecDQuickGO ontologyBLASTP
28074502807803354preprotein translocase subunit YajCQuickGO ontologyBLASTP
280793628090811146queuine tRNA-ribosyltransferaseQuickGO ontologyBLASTP
280916028102301071S-adenosylmethionine--tRNA ribosyltransferase-isomeraseQuickGO ontologyBLASTP
28102342810386153hypothetical protein
28105392810970432transcriptional regulator AsnC-lrp familyQuickGO ontologyBLASTP
28110072811129123hypothetical protein
281109128125871497L-lysine 6-aminotransferaseQuickGO ontologyBLASTP
28126592812814156hypothetical protein
28128412813548708hypothetical proteinBLASTP
281372428151181395Ser-Thr protein phosphatase family proteinQuickGO ontologyBLASTP
281511528162361122putative phytaseQuickGO ontology
281623328187942562TonB-dependent receptorQuickGO ontologyBLASTP