Pre_GI Gene

Host: NC_017295:3250451 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017295:3250451 Clostridium acetobutylicum EA 2018 chromosome, complete genome

Host Lineage: Clostridium acetobutylicum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This organism is a benign saccharolytic and proteolytic soil bacterium capable of producing a number of organic solvents (solventogenic bacterium) through fermentation of various organic compounds. The first strains of C. acetobutyricum were isolated by Chaim Weizman during the World War I and used to develop industrial starch-based acetone, butanol and ethanol fermentation processes. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
32504513251185735tRNA pseudouridine synthase AQuickGO ontologyBLASTP
32511983252001804permease Cobalt permease subfamilyQuickGO ontologyBLASTP
32519983252858861ABC-type transporter ATPase component cobalt transporters subfamilyQuickGO ontologyBLASTP
32528433253688846ABC-type transporter ATPase component cobalt transporters subfamilyQuickGO ontologyBLASTP
3253769325411334550S ribosomal protein L17QuickGO ontologyBLASTP
32541353255082948DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
3255146325576662130S ribosomal protein S4QuickGO ontologyBLASTP
3255794325618939630S ribosomal protein S11QuickGO ontologyBLASTP
3256218325659537830S ribosomal protein S13QuickGO ontologyBLASTP
32568333257051219translation initiation factor IF-1QuickGO ontologyBLASTP
32570593257337279Ribosomal protein L14E archaealeukaryotic typeQuickGO ontologyBLASTP
32573503258102753Methionine aminopeptidase MAPQuickGO ontologyBLASTP
32581033258750648adenylate kinaseQuickGO ontologyBLASTP
325877232600551284preprotein translocase subunit SecYQuickGO ontologyBLASTP
3260056326049644150S ribosomal protein L15QuickGO ontologyBLASTP
3260520326069317450S ribosomal protein L30QuickGO ontologyBLASTP
3260706326120349830S ribosomal protein S5QuickGO ontologyBLASTP
3261228326158135450S ribosomal protein L18QuickGO ontologyBLASTP
3261603326214254050S ribosomal protein L6QuickGO ontologyBLASTP
3262169326256739930S ribosomal protein S8QuickGO ontologyBLASTP
3262599326278418630S ribosomal protein S14QuickGO ontologyBLASTP
3262800326334254350S ribosomal protein L5QuickGO ontologyBLASTP
3263365326368532150S ribosomal protein L24QuickGO ontologyBLASTP
3263702326407036950S ribosomal protein L14QuickGO ontologyBLASTP
3264096326435025530S ribosomal protein S17QuickGO ontologyBLASTP
3264373326457620450S ribosomal protein L29QuickGO ontologyBLASTP
3264566326500944450S ribosomal protein L16QuickGO ontologyBLASTP
3265027326569566930S ribosomal protein S3QuickGO ontologyBLASTP
3265712326604733650S ribosomal protein L22QuickGO ontologyBLASTP
3266070326635128230S ribosomal protein S19QuickGO ontologyBLASTP
3266420326725383450S ribosomal protein L2QuickGO ontologyBLASTP
3267307326760329750S ribosomal protein L23QuickGO ontologyBLASTP
3267603326822362150S ribosomal protein L4QuickGO ontologyBLASTP
3268248326888063350S ribosomal protein L3QuickGO ontologyBLASTP
3268940326924830930S ribosomal protein S10QuickGO ontologyBLASTP
32692653269447183hypothetical proteinBLASTP
326955732707501194elongation factor TuQuickGO ontologyBLASTP
327078032728432064elongation factor GQuickGO ontologyBLASTP
3273015327348547130S ribosomal protein S7QuickGO ontologyBLASTP
3273671327404837830S ribosomal protein S12QuickGO ontologyBLASTP
32741413274380240Ribosomal protein HS6-typeQuickGO ontologyBLASTP
327452832780763549DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
327809832818233726DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
3282248328261937250S ribosomal protein L7L12QuickGO ontologyBLASTP
3282671328330963950S ribosomal protein L10QuickGO ontologyBLASTP
3283363328405269050S ribosomal protein L1QuickGO ontologyBLASTP
3284105328453042650S ribosomal protein L11QuickGO ontologyBLASTP
32845643285100537transcription antitermination protein NusGQuickGO ontologyBLASTP
32851353285359225preprotein translocase subunit SecEQuickGO ontologyBLASTP
3285400328554915050S ribosomal protein L33QuickGO ontologyBLASTP
328576632869591194elongation factor TuQuickGO ontologyBLASTP
32874093288047639RNA polymerase factor sigma-70QuickGO ontologyBLASTP
32881133288631519hypothetical proteinBLASTP