Pre_GI Gene

Host: NC_017986:2985514 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017986:2985514 Pseudomonas putida ND6 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
298551429868901377integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
29868832987614732winged helix family two component transcriptional regulatorQuickGO ontologyBLASTP
298774329900402298TonB-dependent siderophore receptorQuickGO ontologyBLASTP
29901912990397207hypothetical proteinBLASTP
29905552990932378hypothetical proteinBLASTP
29909082991447540helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
29918682992083216hypothetical proteinBLASTP
29920802992403324hypothetical proteinBLASTP
299292829940701143hypothetical proteinBLASTP
29941742994953780site-specific recombinaseQuickGO ontologyBLASTP
29949812995829849presumed portal vertex proteinQuickGO ontologyBLASTP
29958652996695831hypothetical proteinBLASTP
29968002997099300hypothetical protein
29974802997587108hypothetical protein
29976552997948294Transposase IS3QuickGO ontologyBLASTP
29979452998808864Putative isxal7 transposase orfb proteinQuickGO ontologyBLASTP
30001703000418249hypothetical proteinBLASTP
30008033000907105hypothetical protein
30009443001234291hypothetical proteinBLASTP
30013943001546153hypothetical protein
300158930027941206hypothetical proteinBLASTP
30029063003595690polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
30035953004287693polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
30043423005094753extracellular solute-binding proteinQuickGO ontologyBLASTP
30051063005879774ABC transporter-like proteinQuickGO ontologyBLASTP