Pre_GI Gene

Host: NC_017986:5605197 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017986:5605197 Pseudomonas putida ND6 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
56051975605781585hypothetical proteinBLASTP
56058165606283468hypothetical proteinBLASTP
560629056104924203YD repeat-containing proteinQuickGO ontologyBLASTP
56104975611093597hypothetical proteinBLASTP
561110656137062601YD repeat-containing proteinQuickGO ontologyBLASTP
56137095614104396hypothetical proteinBLASTP
56141455614282138hypothetical protein
561425356174953243YD repeat-containing proteinQuickGO ontologyBLASTP
56174985618091594hypothetical proteinBLASTP
56181035618267165hypothetical protein
56182605618370111hypothetical protein
56184605618957498YD repeat-containing proteinQuickGO ontologyBLASTP
561916456213202157YD repeat-containing proteinQuickGO ontologyBLASTP
56213135621864552hypothetical proteinBLASTP
56219805622105126rhs-related proteinQuickGO ontologyBLASTP
56221405622244105hypothetical protein
56223075622678372hypothetical proteinBLASTP
56227405622949210hypothetical protein
56229775623882906YD repeat-containing proteinQuickGO ontologyBLASTP
56238915624676786hypothetical proteinBLASTP
56247465625156411hypothetical proteinBLASTP
56251315625271141hypothetical protein
56253235625484162hypothetical protein
56255055625882378hypothetical proteinBLASTP
56259265626108183YD repeat-containing proteinQuickGO ontologyBLASTP
562621756273921176amidohydrolaseQuickGO ontologyBLASTP
562747656287861311Major facilitator transporterQuickGO ontologyBLASTP
562878356302401458amidaseQuickGO ontologyBLASTP
56303055631078774regulatory protein IclRQuickGO ontologyBLASTP
56311575632029873Helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
56321165633033918short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
563303056347451716Putative succinate dehydrogenaseQuickGO ontologyBLASTP
56347455635071327NIPSNAP family proteinQuickGO ontologyBLASTP
563511356364981386Major facilitator transporterQuickGO ontologyBLASTP
56364955637178684HAD family hydrolaseQuickGO ontologyBLASTP
56372795637887609LexA repressorQuickGO ontologyBLASTP
56378875638507621hypothetical proteinBLASTP