Pre_GI Gene

Host: NC_020134:1941523 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020134:1941523 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
194152319436252103glutamine synthetase GlnAQuickGO ontologyBLASTP
194381519450801266adenylosuccinate synthetase PurAQuickGO ontologyBLASTP
194527519463601086chemotaxis response regulator protein-glutamate methylesterase CheBQuickGO ontologyBLASTP
19463511947166816chemotaxis protein methyltransferase 2QuickGO ontologyBLASTP
194746219518804419protein PilJQuickGO ontologyBLASTP
195194019540302091chemotaxis protein CheAQuickGO ontologyBLASTP
19540441954472429protein CheWQuickGO ontologyBLASTP
19544981954857360chemotaxis protein CheYQuickGO ontologyBLASTP
19552621955822561integrase family proteinQuickGO ontologyBLASTP
19563011956528228hypothetical proteinBLASTP
19565551956677123hypothetical protein
195682519580001176carboxynorspermidine decarboxylaseQuickGO ontologyBLASTP
195801119592101200saccharopine dehydrogenaseQuickGO ontologyBLASTP
19593041960155852agmatinase SpeBQuickGO ontologyBLASTP
19601481960993846spermidine synthase SpeEQuickGO ontologyBLASTP
196099619624381443arginine decarboxylase SpeAQuickGO ontologyBLASTP
19625891962714126hypothetical protein
19627361963266531hypothetical proteinBLASTP
1963547196356317
19650141965145132hypothetical protein
196561719666781062S-layer domain proteinQuickGO ontologyBLASTP
19674701967781312hypothetical protein
19682231968417195hypothetical proteinBLASTP
19684931968615123hypothetical proteinBLASTP
19691701969712543transposase mutator typeQuickGO ontologyBLASTP
19696931970265573transposase mutator typeQuickGO ontologyBLASTP
197036919730682700helicase domain proteinQuickGO ontologyBLASTP
197310719761543048hypothetical proteinBLASTP
19761511976741591hypothetical proteinBLASTP
197676419800663303hypothetical proteinBLASTP