Pre_GI Gene

Host: NC_020389:1936000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020389:1936000 Methanosarcina mazei Tuc01, complete genome

Host Lineage: Methanosarcina mazei; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This organism is a strictly anaerobic, non-motile, methane-producing archaeon. This organism can also aggregate forming large irregular shaped clumps of cells. Occasionally these aggregates can grow to 1000 microns or more in diameter. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Can be found in decaying leaf litter, garden soil, sewage treatment sludge digestors, black mud, feces of herbivores and other urban waste and sewage products.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19360631936341279DNA-directed RNA polymerase subunit LQuickGO ontologyBLASTP
193664619378061161O-phosphoseryl-tRNACysteinyl-tRNA synthaseQuickGO ontologyBLASTP
19379721938310339transcriptional regulatorQuickGO ontology
19385491939103555Ferredoxin domain containing proteinQuickGO ontologyBLASTP
193934419406061263Diaminopimelate decarboxylaseQuickGO ontologyBLASTP
19408711940999129hypothetical protein
19413421941467126Diaminopimelate decarboxylaseQuickGO ontologyBLASTP
19416581941849192hypothetical protein
194185619433941539ArylsulfataseQuickGO ontologyBLASTP
194355719448761320Arylsulfatase regulatory proteinQuickGO ontologyBLASTP
19449301945049120hypothetical protein
194549219472461755DNA polymerase X familyQuickGO ontologyBLASTP
194732519490641740ATP-dependent DNA ligaseQuickGO ontologyBLASTP
19494261949878453Phenylacetic acid degradation protein paaIQuickGO ontologyBLASTP
19499751950169195hypothetical protein
19505181950682165hypothetical protein
195068119525101830hypothetical protein
19529521953719768Potassium voltage-gated channel subfamily KQT potassium channel VIC familyQuickGO ontologyBLASTP
19537781953987210hypothetical protein
19540461954702657hypothetical protein
19558761956394519acetyltransferase GNAT familyQuickGO ontologyBLASTP
19565521957028477Transcriptional regulator MarR familyQuickGO ontologyBLASTP
19574411957884444hypothetical proteinBLASTP
19579771958153177hypothetical protein
19581501958560411hypothetical proteinBLASTP
19585531958708156hypothetical protein