Pre_GI Gene

Host: NC_021182:4557608 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:4557608 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45576084558342735pseudouridylate synthase IQuickGO ontologyBLASTP
45584504559250801ABC-type cobalt transport system permease component CbiQQuickGO ontologyBLASTP
45592434560106864ABC-type cobalt transport system ATPase componentQuickGO ontologyBLASTP
45600914560936846ABC-type cobalt transport system ATPase componentQuickGO ontologyBLASTP
45610004561341342ribosomal protein L17QuickGO ontologyBLASTP
45613544562301948DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
45623624562982621ribosomal protein S4 bacterialorganelle typeQuickGO ontologyBLASTP
4563011456340639630S ribosomal protein S11QuickGO ontologyBLASTP
4563424456379537230S ribosomal protein S13QuickGO ontologyBLASTP
45639444564057114ribosomal protein L36 bacterial typeQuickGO ontologyBLASTP
45640754564293219translation initiation factor IF-1QuickGO ontologyBLASTP
45643014564579279hypothetical proteinBLASTP
45645844565342759methionine aminopeptidase type IQuickGO ontologyBLASTP
45653514565995645adenylate kinase family proteinQuickGO ontologyBLASTP
456601545672981284preprotein translocase SecY subunitQuickGO ontologyBLASTP
45673004567740441ribosomal protein L15 bacterialorganelleQuickGO ontologyBLASTP
45677664567945180ribosomal protein L30 bacterialorganelleQuickGO ontologyBLASTP
45679574568454498ribosomal protein S5 bacterialorganelle typeQuickGO ontologyBLASTP
45684714568833363ribosomal protein L18 bacterial typeQuickGO ontologyBLASTP
45688574569396540ribosomal protein L6 bacterial typeQuickGO ontologyBLASTP
45694204569818399ribosomal protein S8QuickGO ontologyBLASTP
45698484570033186ribosomal protein S14QuickGO ontologyBLASTP
45700494570591543ribosomal protein L5QuickGO ontologyBLASTP
45706144570937324ribosomal protein L24 bacterialorganelleQuickGO ontologyBLASTP
45709564571324369ribosomal protein L14 bacterialorganelleQuickGO ontologyBLASTP
4571353457160725530S ribosomal protein S17QuickGO ontologyBLASTP
45716284571831204ribosomal protein L29QuickGO ontologyBLASTP
45718214572264444ribosomal protein L16 bacterialorganelleQuickGO ontologyBLASTP
45722824572950669ribosomal protein S3 bacterial typeQuickGO ontologyBLASTP
45729674573302336ribosomal protein L22 bacterial typeQuickGO ontologyBLASTP
45733264573610285ribosomal protein S19 bacterialorganelleQuickGO ontologyBLASTP
45736734574506834ribosomal protein L2 bacterialorganellarQuickGO ontologyBLASTP
45745674574863297ribosomal protein L23QuickGO ontologyBLASTP
4574863457548362150S ribosomal protein L4 bacterialorganelleQuickGO ontologyBLASTP
4575508457613763050S ribosomal protein L3 bacterialQuickGO ontologyBLASTP
45762074576515309ribosomal protein S10 bacterialorganelleQuickGO ontologyBLASTP
457699145781841194translation elongation factor TUQuickGO ontologyBLASTP
457821045802732064translation elongation factor EF-GQuickGO ontologyBLASTP
45803564580826471ribosomal protein S7 bacterialorganelleQuickGO ontologyBLASTP
45810264581403378ribosomal protein S12 bacterialorganelleQuickGO ontologyBLASTP
45814634581702240ribosomal protein HS6-type S12L30L7aQuickGO ontologyBLASTP
458180645853333528DNA-directed RNA polymerase beta subunit predominant formQuickGO ontologyBLASTP
458535545890593705DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
45893454589713369ribosomal protein L7L12QuickGO ontologyBLASTP
45897454590257513ribosomal protein L10QuickGO ontologyBLASTP
45904594591148690ribosomal protein L1QuickGO ontologyBLASTP
4591204459162942650S ribosomal protein L11QuickGO ontologyBLASTP
45917034592257555transcription terminationantitermination factor NusGQuickGO ontologyBLASTP
45922744592498225preprotein translocase SecE subunitQuickGO ontologyBLASTP
45925424592691150ribosomal protein L33QuickGO ontologyBLASTP
459287845940711194translation elongation factor TUQuickGO ontologyBLASTP
4594171459424676tRNA-ThrQuickGO ontology
45943944595038645RNA polymerase sigma-H factorQuickGO ontologyBLASTP
45951114595623513putative RNA-binding protein containing a PIN domainQuickGO ontologyBLASTP
45956264596456831rRNA methylase putative group 3QuickGO ontologyBLASTP
45964934597302810thymidylate synthase flavin-dependentQuickGO ontologyBLASTP