EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_003280: Caenorhabditis elegans chromosome II, complete sequence

NCBI: NC_003280

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
12146968217009923132Island text1.5552820.859741.6616-2146968.gbk
22208123*223233624214Island text1.331234.308135.388-2208123.gbk
32546294257581229519Island text1.4856324.580518.9-2546294.gbk
42835056*285809923044Island text1.4101533.45726.0568-2835056.gbk
53558000*358143623437Island text1.3295628.96427.9876BLASTN+3558000.gbk
66489035*650709918065Island text1.4733435.6749.933-6489035.gbk
76821500*684726925770Island text1.8638422.051330.1174-6821500.gbk
87667956*769384525890Island text1.7281620.68724.4533-7667956.gbk
910347083*1037009923017Island text1.4070223.832736.125-10347083.gbk
1010569000*1059249923500Island text1.6287227.36521.5593-10569000.gbk
11106755991071423638638Island text1.664825.233534.0608-10675599.gbk
1213244000*1326609922100Island text1.774224.984848.7514-13244000.gbk
1313792211*1383109938889Island text1.5442729.219423.054-13792211.gbk
1413905500*1392465019151Island text1.489728.216238.8842-13905500.gbk