EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_003282: Caenorhabditis elegans chromosome IV, complete sequence

NCBI: NC_003282

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
190526393956234300Island text1.7592430.443427.7343-905263.gbk
21452000147509223093Island text1.3128231.225724.7533-1452000.gbk
34156000417829922300Island text1.5073532.599730.2777-4156000.gbk
44764000*478309919100Island text1.5354621.102934.52-4764000.gbk
55056965*508009923135Island text1.4159721.990511.3595-5056965.gbk
65467500*548620118702Island text1.5649325.188516.3438-5467500.gbk
75643241*566609922859Island text1.4590621.163719.302BLASTN-5643241.gbk
85975000*600402129022Island text1.6214526.012326.9399-5975000.gbk
95975564*601958244019Island text1.7101228.483729.9915-5975564.gbk
106337644*636059922956Island text1.9343926.187830.3886-6337644.gbk
116526953*654709920147Island text1.4838920.464517.4443-6526953.gbk
127329668*735309923432Island text1.6286623.807433.8637-7329668.gbk
138254500*827715322654Island text1.6035127.545228.1631-8254500.gbk
149540000*956658826589Island text3.3564832.900352.5176-9540000.gbk
1511392500*1141659924100Island text1.5724520.548620.1608-11392500.gbk
1611570520*1160103230513Island text1.5185922.136424.1442-11570520.gbk
1711970714*1201085740144Island text1.5646133.99434.4649-11970714.gbk
1813880131*1390282222692Island text1.5495327.985229.6707-13880131.gbk
1914196000*1422433228333Island text1.495443.196731.3071-14196000.gbk
2014610000*1463209922100Island text1.477817.983929.2484BLASTN-14610000.gbk
2115025689*1505609930411Island text1.764134.847421.016-15025689.gbk
2215587500*1560000012501Island text1.8672932.182519.0954-15587500.gbk
2315931790*1595478022991Island text1.7710623.888618.1508BLASTN-15931790.gbk
2416230420*1625023519816Island text1.5850122.124322.0977-16230420.gbk
2516303582*1632316319582Island text1.5168131.754637.4954-16303582.gbk
2616916000*1693906723068Island text1.454924.221822.6154-16916000.gbk