EuGI Island

Some Help

Go to Home Page

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_003283: Caenorhabditis elegans chromosome V, complete sequence

NCBI: NC_003283

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1316000*33809922100Island text1.4334927.875722.25-316000.gbk
24291822*431982228001Island text2.5367525.829952.8566-4291822.gbk
37307371*733009922729Island text1.4174321.619626.3004-7307371.gbk
48470047*850213932093Island text2.8010428.116339.4877BLASTN+8470047.gbk
58654000*867727123272Island text1.4305423.048423.7544BLASTN-8654000.gbk
68876013*890189825886Island text2.8464236.613449.5127BLASTN-8876013.gbk
79108000*913092122922Island text1.4125419.406632.8725-9108000.gbk
810708500*1073359925100Island text2.0750724.357132.2733-10708500.gbk
911067000*1108559918600Island text1.5422121.992530.0097-11067000.gbk
10114746931149899924307Island text1.5317218.82630.2128-11474693.gbk
11154496131547598726375Island text1.474825.68730.095BLASTN-15449613.gbk
1215491050*1552198730938Island text1.6757330.33225.2284BLASTN-15491050.gbk
1317124000*1714309919100Island text1.6845639.922239.6623-17124000.gbk
14184265521845259926048Island text1.7753930.671827.0776-18426552.gbk
1518640309*1868430343995Island text1.836537.860926.9382-18640309.gbk
16204907402051009919360Island text1.4687727.936524.7868-20490740.gbk