EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_004316: Plasmodium falciparum 3D7 chromosome 12, complete sequence

NCBI: NC_004316

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
125315227159918448Island text2.0863910.040721.3972BLASTN-253152.gbk
2272317*30000027684Island text3.511.692426.8364BLASTN-272317.gbk
330821133780229592Island text2.5753512.043425.1621-308211.gbk
4343322*37586932548Island text1.895129.0831722.183BLASTN+343322.gbk
547950050222322724Island text2.573319.832517.5765-479500.gbk
6504000*52609922100Island text3.8712710.888920.9161BLASTN-504000.gbk
7674000*69845024451Island text1.553677.9796913.5309-674000.gbk
875764279066633025Island text2.9221519.499830.3204-757642.gbk
983124585473223488Island text2.4775910.919317.5593-831245.gbk
1089057392009929527Island text1.855588.9224919.3558-890573.gbk
111033543105627322731Island text1.683787.812514.8774-1033543.gbk
121141574118609944526Island text2.2268811.884425.265-1141574.gbk
131358000137957621577Island text2.222069.7799122.151-1358000.gbk
141407662143598328322Island text2.1117210.144518.0946BLASTN-1407662.gbk
151628000165167623677Island text1.8653610.302221.7444BLASTN-1628000.gbk
161825947185214526199Island text1.4707610.451113.1502BLASTN-1825947.gbk
171988224200073112508Island text1.8651414.572325.0248-1988224.gbk
182041279*206459923321Island text2.5754210.962319.7421-2041279.gbk