EuGI: Island

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_005785: Ashbya gossypii ATCC 10895 chromosome IV, complete sequence

NCBI: NC_005785

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#	Start	End	Length	Island Text	GRV_RV	D	PS	BLASTN	Key Word Confirmation	Download Island
1	1	24610	24610	Island text	3.01548	44.1051	18.061	BLASTN	-	1.gbk
2	111251	135383	24133	Island text	2.16629	37.8557	19.4664		-	111251.gbk
3	165193	187449	22257	Island text	1.75618	38.8363	25.3709		-	165193.gbk
4	212848	235933	23086	Island text	1.93302	37.9481	33.1364	BLASTN	-	212848.gbk
5	361663	381477	19815	Island text	1.54692	38.0259	40.5683		-	361663.gbk
6	427542	452571	25030	Island text	1.39216	37.0866	27.9937		-	427542.gbk
7	515632*	541077	25446	Island text	1.97149	37.992	37.4848		+	515632.gbk
8	591938	609705	17768	Island text	1.66718	36.7491	21.1049		-	591938.gbk
9	660801*	681661	20861	Island text	1.74697	39.4334	35.8753		+	660801.gbk
10	690994	739304	48311	Island text	3.83831	46.9986	23.082		-	690994.gbk
11	826090	850599	24510	Island text	1.66553	39.0048	26.7002		-	826090.gbk
12	854341	875331	20991	Island text	1.60908	39.7586	32.1954	BLASTN	-	854341.gbk
13	893517*	931720	38204	Island text	1.86156	38.5195	26.5283	BLASTN	+	893517.gbk
14	1005190	1029351	24162	Island text	1.45432	39.482	30.899		-	1005190.gbk
15	1042000	1064099	22100	Island text	1.588	38.2174	45.3953		-	1042000.gbk
16	1077364*	1100000	22637	Island text	1.98334	39.3938	36.5838		-	1077364.gbk
17	1117500*	1136099	18600	Island text	1.60654	38.8801	38.0883		+	1117500.gbk
18	1191801	1203206	11406	Island text	1.55415	35.4116	34.7241	BLASTN	-	1191801.gbk
19	1193424	1215859	22436	Island text	2.2015	41.3693	21.9353	BLASTN	-	1193424.gbk
20	1275545*	1301484	25940	Island text	2.11937	41.1023	16.9083		+	1275545.gbk
21	1294057*	1314614	20558	Island text	1.53334	35.9071	27.4638		+	1294057.gbk
22	1372985	1417204	44220	Island text	1.87314	38.2436	29.9177	BLASTN	-	1372985.gbk
23	1417385	1442229	24845	Island text	1.68142	37.9377	22.2622		-	1417385.gbk

EuGI Island