EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_005786: Ashbya gossypii ATCC 10895 chromosome V, complete sequence

NCBI: NC_005786

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
144085*6902024936Island text1.4892541.877427.9937BLASTN+44085.gbk
214003316093720905Island text1.8228336.369252.3389-140033.gbk
321700023729420295Island text1.9327240.483130.3143BLASTN-217000.gbk
424000826358523578Island text2.1123341.511123.831-240008.gbk
5272000*29922527226Island text2.0439640.65425.7928BLASTN+272000.gbk
6437279*45721919941Island text1.8834140.716229.4981-437279.gbk
7483500*50068917190Island text2.0206242.967421.8662+483500.gbk
849081254009949288Island text1.7935539.925420.0675-490812.gbk
956328858410820821Island text1.8058138.916636.1554BLASTN-563288.gbk
1061473464052525792Island text2.4962743.548520.821-614734.gbk
1167029969541625118Island text2.2511342.942622.2865BLASTN-670299.gbk
1270851473331424801Island text1.4597539.767831.8675BLASTN-708514.gbk
1377895980069421736Island text1.6529935.720725.5375-778959.gbk
14794379*82580631428Island text2.5019242.069828.5373+794379.gbk
15946208*96617719970Island text1.727435.153227.08+946208.gbk
16977968*100000022033Island text2.0101239.706132.4864BLASTN+977968.gbk
171076500109874822249Island text1.6006433.514735.0347-1076500.gbk
181145779116827022492Island text1.8360836.705122.8651-1145779.gbk
191187651120385016200Island text1.9999439.213420.1066BLASTN-1187651.gbk
201230818126573134914Island text1.7311939.062725.7745BLASTN-1230818.gbk
211284900130310218203Island text1.3281137.57923.2428-1284900.gbk
221295089134009945011Island text1.4503339.733327.1955BLASTN-1295089.gbk
231430636*146912238487Island text2.1063943.953625.6503+1430636.gbk