EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_005787: Ashbya gossypii ATCC 10895 chromosome VI, complete sequence

NCBI: NC_005787

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1413246336222039Island text1.6862540.438640.1137BLASTN-41324.gbk
27266910074828080Island text1.789435.768436.614-72669.gbk
3129492*15112921638Island text1.4630537.032737.3066BLASTN-129492.gbk
437605740019324137Island text1.8069638.831131.7053-376057.gbk
5410922*43727326352Island text2.4278647.822313.9285BLASTN+410922.gbk
647436649849924134Island text2.8413849.711224.651-474366.gbk
750900052681017811Island text2.1261233.469113.9664-509000.gbk
854850056813619637Island text1.5941433.681936.9777-548500.gbk
960841362968321271Island text1.8765339.803924.4079-608413.gbk
1063838466002021637Island text1.7311740.590534.4244BLASTN-638384.gbk
1166784368659918757Island text1.7981438.600426.9491BLASTN-667843.gbk
12690500*70809917600Island text1.6457635.59726.7633-690500.gbk
1382345784786324407Island text2.0727840.435728.5266-823457.gbk
1494543197110525675Island text1.6551738.818945.032BLASTN-945431.gbk
151019157104428925133Island text2.3354942.353325.0225-1019157.gbk
161044722*106809923378Island text1.590335.095526.5928-1044722.gbk
171185500120144815949Island text1.6493539.135520.4885-1185500.gbk
181214676124115926484Island text1.461634.897933.4267BLASTN-1214676.gbk
191254966127659721632Island text1.6418738.618731.301BLASTN-1254966.gbk
20129102713000008974Island text1.7315636.595340.3054-1291027.gbk
211292435131338820954Island text1.750939.191420.5765-1292435.gbk
221361012138072819717Island text2.371339.736535.1187BLASTN-1361012.gbk
231450500147549824999Island text1.9099339.219826.594BLASTN-1450500.gbk
241492000*152374731748Island text2.1138945.628618.0777BLASTN+1492000.gbk
251682500170102818529Island text1.9932844.436123.3262-1682500.gbk
261707536172970522170Island text1.9844742.765520.5616BLASTN-1707536.gbk
271754993179390438912Island text2.2993143.317622.3967BLASTN-1754993.gbk