EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_005788: Ashbya gossypii ATCC 10895 chromosome VII, complete sequence

NCBI: NC_005788

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
112845328453Island text3.8788549.460922.4763-1.gbk
216250018609923600Island text2.0841644.038624.9262-162500.gbk
3269216*29355224337Island text2.1472739.485930.8046BLASTN-269216.gbk
428950031011320614Island text1.8896337.056219.0309-289500.gbk
538760540039212788Island text1.3680938.576138.4761-387605.gbk
6765210*79721732008Island text1.9211441.271121.558-765210.gbk
787852190000021480Island text2.8429835.260117.0023-878521.gbk
8967168100000032833Island text1.7955840.476934.8196-967168.gbk
91027911*105347225562Island text3.3688643.35223.2685BLASTN+1027911.gbk
101119828115009930272Island text1.778440.028121.379-1119828.gbk
111194278*122269128414Island text2.0015740.265323.2915-1194278.gbk
121244086128409940014Island text2.3420340.871926.7565-1244086.gbk
131289590131382724238Island text1.903641.751328.315-1289590.gbk
141335051136181126761Island text1.8761739.323322.6323-1335051.gbk
151387473140100413532Island text1.8939339.751540.2546BLASTN-1387473.gbk
161392000*143958547586Island text1.8871337.644248.7973BLASTN-1392000.gbk
171492800152022327424Island text2.7163741.361725.4045BLASTN-1492800.gbk
181523661154658422924Island text1.7906436.363120.4714BLASTN-1523661.gbk
191560217*158336923153Island text2.5131641.532722.7643BLASTN+1560217.gbk
201651934*167380821875Island text1.6566338.714929.1042BLASTN+1651934.gbk
211685009*170080115793Island text1.6383536.995432.7527+1685009.gbk
221692238*173309940862Island text1.5725738.172636.9863BLASTN+1692238.gbk
231789605180094911345Island text1.4112841.409344.0066-1789605.gbk