EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_006987: Cryptosporidium parvum Iowa II chromosome 8, whole genome shotgun

NCBI: NC_006987

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
123664*4671123048Island text1.5097716.427512.9005BLASTN-23664.gbk
217150020338131882Island text1.48045e+1337.37983.36564BLASTN-171500.gbk
3197898*24371545818Island text1.8077714.095422.3036BLASTN+197898.gbk
433030636078730482Island text1.5067413.709917.0362-330306.gbk
546234849449932152Island text1.7740917.755521.6322BLASTN-462348.gbk
6498000*53016832169Island text1.7529610.59113.0954-498000.gbk
756484958845823610Island text1.348912.718919.3933+564849.gbk
8868916*89173822823Island text1.4936616.859215.279+868916.gbk
9925021*94410719087Island text1.506916.192416.7052-925021.gbk
10983693*100083917147Island text1.8801913.053326.4709BLASTN+983693.gbk
111039478105947720000Island text1.8441613.316224.4143-1039478.gbk
121136000115359917600Island text1.4902913.6439.88549-1136000.gbk
131300500132707226573Island text2.0049618.171727.6609-1300500.gbk