EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_007087: Dictyostelium discoideum AX4 chromosome 1 chromosome, whole genome

NCBI: NC_007087

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1485006809919600Island text2.197520.259820.9682-48500.gbk
212371416694243229Island text2.1411223.869224.3306-123714.gbk
338629640000013705Island text3.4751221.615917.7807BLASTN-386296.gbk
457334160000026660Island text1.5707713.916624.9848-573341.gbk
562200065906537066Island text1.6220710.840212.8761-622000.gbk
673200075687724878Island text1.3016514.895415.1724BLASTN-732000.gbk
782528985390328615Island text5.7701421.568442.2707-825289.gbk
81051356107453123176Island text1.9770215.114623.8085BLASTN-1051356.gbk
91217963123598918027Island text2.0120815.365919.6579-1217963.gbk
101596500162126324764Island text1.5038813.174915.014-1596500.gbk
111768454179899930546Island text1.6878315.81232.3684-1768454.gbk
121944500198413939640Island text3.4709116.505933.0163BLASTN-1944500.gbk
132053000207159918600Island text2.5979414.844825.5932-2053000.gbk
142281503230257321071Island text1.5236511.671116.5205-2281503.gbk
152311232233559924368Island text1.6330311.308421.7018-2311232.gbk
162413000*243459921600Island text1.7007313.928711.9874BLASTN+2413000.gbk
172493841*251973425894Island text2.1832114.958725.1641BLASTN+2493841.gbk
182525867254809922233Island text1.6115714.44712.7406-2525867.gbk
192684500*270012215623Island text1.43615.077815.6718BLASTN+2684500.gbk
202847685287305025366Island text3.3245417.83238.4258-2847685.gbk
212926042295026424223Island text1.6549411.551620.508BLASTN-2926042.gbk
222956500*297559919100Island text1.5643114.117226.0426+2956500.gbk
233020703304731726615Island text1.8072213.227120.0679-3020703.gbk
243115500314148825989Island text1.4793414.7138.83177-3115500.gbk
253214500323547420975Island text2.1230514.550714.8807-3214500.gbk
263559643358496825326Island text1.9784813.876624.7577BLASTN-3559643.gbk
273588898365819169294Island text2.6340414.58325.8791-3588898.gbk
283831693385107319381Island text2.4093316.446221.1218-3831693.gbk
293990838401809927262Island text1.4490613.375514.1674BLASTN-3990838.gbk
304075572410285727286Island text1.5036511.192912.9248-4075572.gbk
314112500*413526122762Island text1.6689913.055316.9529+4112500.gbk
324486597451234025744Island text2.8269618.156436.3376-4486597.gbk
334540670*456461123942Island text2.1087715.173423.4042+4540670.gbk
344691410471995728548Island text1.3450619.297217.3651-4691410.gbk
354808000482641218413Island text1.7571719.832235.0774-4808000.gbk