EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_007344: Theileria parva strain Muguga chromosome 1, complete sequence,

NCBI: NC_007344

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
130392680823770Island text1.4298627.273824.93-3039.gbk
217479420127026477Island text1.9197422.086925.9612-174794.gbk
343900046459925600Island text1.7550820.55233.5088-439000.gbk
452833355608327751Island text1.8781921.924137.7523-528333.gbk
566132968409922771Island text1.5466419.874831.1-661329.gbk
676326278877125510Island text1.8155327.315539.8039-763262.gbk
7988000101338925390Island text3.9473124.202238.6714-988000.gbk
81116000113946023461Island text1.8115322.736727.0857-1116000.gbk
91191246121887427629Island text1.3661819.163425.3076-1191246.gbk
101325389135390328515Island text1.8275420.449332.8603BLASTN+1325389.gbk
111514618153600121384Island text2.1761827.250928.6347BLASTN-1514618.gbk
121690089171829228204Island text1.5690317.695217.6148BLASTN-1690089.gbk
131750915177439423480Island text1.6993117.30330.9295-1750915.gbk
141803295182599322699Island text1.787619.224226.474BLASTN-1803295.gbk
151922620194402821409Island text2.742726.186153.3078BLASTN-1922620.gbk
162109181213209922919Island text1.5730522.416128.6423-2109181.gbk
172185214*220216216949Island text1.5124215.16926.7207+2185214.gbk
182267123229399926877Island text1.7827416.54124.665-2267123.gbk
192308595233214423550Island text1.4480816.53724.1625BLASTN-2308595.gbk
202507557253684229286Island text1.5632216.184329.3032BLASTN-2507557.gbk