EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_007345: Theileria parva strain Muguga chromosome 2, complete sequence,

NCBI: NC_007345

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
113066215452623865Island text1.436417.248322.3109-130662.gbk
223449926215227654Island text1.7531522.609630.1369-234499.gbk
334800037118523186Island text1.3819121.218434.6754+348000.gbk
450981553440024586Island text1.7359123.072226.8203-509815.gbk
570310072629023191Island text1.5059817.412533.646BLASTN-703100.gbk
676341378809924687Island text1.379219.777520.0877+763413.gbk
792150093955018051Island text1.4876623.972536.5574-921500.gbk
8982241100298120741Island text1.6423521.467727.3551+982241.gbk
91159000118213423135Island text1.5324919.443122.3515-1159000.gbk
101346563137172125159Island text1.5413217.327318.6259-1346563.gbk
111390216141628626071Island text2.0715928.862230.992-1390216.gbk
121512455154403631582Island text2.0079627.287433.6869-1512455.gbk
131561133159399932867Island text1.6396223.449732.9395-1561133.gbk
141770334179696326630Island text1.6853827.682929.9752-1770334.gbk
151906393192459918207Island text1.7894719.481631.9649-1906393.gbk