EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_009919: Plasmodium vivax SaI-1 chromosome 14, whole genome shotgun sequenc

NCBI: NC_009919

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
16250010000037501Island text1.7016614.014210.4181-62500.gbk
218812422969341570Island text1.9098922.934947.1215-188124.gbk
333224535644624202Island text1.751226.453149.5797-332245.gbk
441547643609920624Island text1.592925.407345.042-415476.gbk
558100060199520996Island text1.8012128.484947.7269-581000.gbk
687500090042525426Island text1.7992924.710248.9365-875000.gbk
7978202100000021799Island text1.9619931.037254.8849-978202.gbk
81033500105632022821Island text1.6092228.745745.2875BLASTN-1033500.gbk
91160500118050720008Island text1.5721925.221943.1584BLASTN-1160500.gbk
101227000124849121492Island text1.6244732.735550.6812-1227000.gbk
111488000150566917670Island text1.5013626.532145.8034BLASTN-1488000.gbk
121575000160353528536Island text1.7758827.857549.6437-1575000.gbk
132015500204137525876Island text2.1264932.211249.3354-2015500.gbk
142120000215259932600Island text4.6019440.65076.93436BLASTN-2120000.gbk
152215500223610320604Island text1.6816629.72737.9624-2215500.gbk
162494030252160727578Island text2.1811636.338854.7752-2494030.gbk
172834000286071826719Island text1.5154933.037549.8599-2834000.gbk
182889845291856628722Island text1.5130533.566435.5768-2889845.gbk
193045944306811822175Island text7.5643815.044433.5973BLASTN-3045944.gbk
203100099312041720319Island text2.6155615.15089.90376-3100099.gbk