EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011129: Theileria annulata strain Ankara genomic DNA chromosome 1

NCBI: NC_011129

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
158893209926211Island text1.4688633.250231.6482-5889.gbk
217632520000023676Island text1.5324715.314936.5574-176325.gbk
320332922773624408Island text2.0314624.696736.2678-203329.gbk
434755937097923421Island text1.7781612.743218.3579BLASTN-347559.gbk
554366957217128503Island text2.4120520.903138.9127BLASTN-543669.gbk
6620500*64425923760Island text1.797826.690215.8099-620500.gbk
776400078809924100Island text1.822318.077131.1513BLASTN-764000.gbk
878859881309924502Island text1.9185620.95724.7494BLASTN-788598.gbk
984971588163831924Island text1.6171219.254631.2279-849715.gbk
1097550099730821809Island text3.834423.586236.2153-975500.gbk
11991544101809926556Island text1.8860819.257734.9677BLASTN-991544.gbk
121023018*104478921772Island text1.8525220.665115.4282-1023018.gbk
131155000117568620687Island text1.9619421.71722.1024-1155000.gbk
141324091135279728707Island text2.0115625.885418.823-1324091.gbk
151422666144648623821Island text2.6681530.03844.859-1422666.gbk
161509846153432524480Island text2.659918.105515.3856BLASTN-1509846.gbk
171634425*166190127477Island text1.765520.452319.9842+1634425.gbk
181705884172709921216Island text1.4309320.774625.064BLASTN-1705884.gbk
191766318179450428187Island text1.5054819.373325.571BLASTN-1766318.gbk
201842174187023128058Island text1.7015317.844130.9295-1842174.gbk
211888886190164712762Island text2.3440624.134944.4824BLASTN-1888886.gbk
222037968205779319826Island text1.5616122.227619.6339-2037968.gbk
232164741218379219052Island text1.5712822.981530.4589-2164741.gbk
242212976223307820103Island text1.6411716.123526.9826BLASTN-2212976.gbk
252377000240095223953Island text2.2839422.746937.2258-2377000.gbk
262414000243958625587Island text2.281617.549734.0592-2414000.gbk
272590787262109930313Island text2.3850326.617622.1491-2590787.gbk