EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011910: Plasmodium knowlesi strain H chromosome 9, complete sequence

NCBI: NC_011910

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1380005759919600Island text2.4106223.178147.4906-38000.gbk
238957241159922028Island text1.9386425.924149.5456-389572.gbk
374483576859923765Island text2.3477428.981349.6378-744835.gbk
483163286208730456Island text7.86701e+1237.24570-831632.gbk
51060000*109871138712Island text8.85119e+1240.5480-1060000.gbk
61362203139493632734Island text1.7035835.06443.3321-1362203.gbk
71412882145262439743Island text1.7362720.295140.3654BLASTN-1412882.gbk
81576669160677430106Island text2.5480422.695849.0407-1576669.gbk
91642991*166959926609Island text2.2184523.457344.0105-1642991.gbk
101712285173676124477Island text2.2994924.811545.2065-1712285.gbk
111737453176356226110Island text2.4566627.426547.0368-1737453.gbk
121784000180000016001Island text2.0963323.370651.3461BLASTN-1784000.gbk
131971097200089729801Island text1.4428823.78441.9966-1971097.gbk
142034879205909924221Island text2.3642232.880111.6534-2034879.gbk
152077189210009922911Island text2.0716430.234737.2944-2077189.gbk