EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011912: Plasmodium knowlesi strain H chromosome 11, complete sequence

NCBI: NC_011912

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
119750022059923100Island text1.7981421.488335.49-197500.gbk
226150028031318814Island text1.6095323.263240.9043-261500.gbk
333585736273126875Island text1.7618421.331539.7172-335857.gbk
456406260235938298Island text1.4976432.630144.3781-564062.gbk
561130663809126786Island text1.9827124.522745.4867-611306.gbk
665400067559921600Island text2.1390428.049950.5901BLASTN-654000.gbk
71220098124409924002Island text2.1840223.331741.3997-1220098.gbk
81263500128113717638Island text1.5010425.018240.6931-1263500.gbk
91306000*132825622257Island text2.31827.058151.1682+1306000.gbk
101593000161714424145Island text1.7605923.607746.1018BLASTN-1593000.gbk
111660253168009919847Island text2.2387728.577953.5266-1660253.gbk
121757420178160624187Island text1.9020232.755540.1728-1757420.gbk
131993445201509921655Island text1.9540827.699456.4776-1993445.gbk