EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011913: Plasmodium knowlesi strain H chromosome 12, complete sequence

NCBI: NC_011913

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
147024749732427078Island text1.9807222.985940.2851-470247.gbk
252655355152824976Island text1.80324.003848.2074BLASTN-526553.gbk
362364264836824727Island text2.3628724.806944.9736+623642.gbk
4993000102801835019Island text8.87976e+1140.49055.19874-993000.gbk
51154000120000046001Island text1.7828331.868746.893-1154000.gbk
61213366123898225617Island text1.5613324.197541.9783-1213366.gbk
71332000135409922100Island text1.3858424.592742.2646-1332000.gbk
81392000141793725938Island text1.441619.272136.2948-1392000.gbk
91477642150067923038Island text1.6367918.716630.3447-1477642.gbk
101564500158588921390Island text2.06826.372544.6687BLASTN-1564500.gbk
111689398172228832891Island text1.6410520.355130.7102-1689398.gbk
121753011177709424084Island text1.7407919.582937.1483-1753011.gbk
132335000235609921100Island text2.1648426.544346.7597-2335000.gbk
142485140250057915440Island text1.6716624.39248.1118-2485140.gbk
152568500258609917600Island text1.8747919.810936.8985-2568500.gbk
162673216270266929454Island text2.6443520.158538.5351-2673216.gbk
172749500278971440215Island text3.7351625.875952.1956-2749500.gbk
182804500282309918600Island text1.524419.493842.6219-2804500.gbk
192871897289649924603Island text1.6047821.218435.4834BLASTN-2871897.gbk
202918426294228523860Island text2.1588419.625536.933BLASTN-2918426.gbk
212981791*301853036740Island text1.6909516.111431.2523-2981791.gbk
223043758306842524668Island text1.968218.969428.8963-3043758.gbk