EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_011915: Plasmodium knowlesi strain H chromosome 14, complete sequence

NCBI: NC_011915

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
117650019849922000Island text1.5218420.005532.9334-176500.gbk
2375071*40033625266Island text1.590625.672816.3499-375071.gbk
346910350000030898Island text1.619129.988734.2706-469103.gbk
4547857*57219724341Island text1.7776825.875543.3305+547857.gbk
583197985856026582Island text1.4840218.98134.8642-831979.gbk
688600090000014001Island text1.4098320.051129.492BLASTN-886000.gbk
794100096182320824Island text2.5682726.347449.4351-941000.gbk
81118771114544826678Island text4.9396232.4075.58736-1118771.gbk
91338474137159833125Island text2.0689e+1339.96320-1338474.gbk
101424262*144659922338Island text2.0172127.752923.8803+1424262.gbk
111592500161659924100Island text1.7940321.735236.9259-1592500.gbk
121646360167009923740Island text1.5574421.206233.9749-1646360.gbk
131742000176109919100Island text1.8109328.857648.1895-1742000.gbk
141766500178823121732Island text2.1444124.828246.5569-1766500.gbk
151977316200080523490Island text1.4652323.024150.3472-1977316.gbk
162029084205316424081Island text2.117529.032348.2839-2029084.gbk
172247017226918922173Island text1.59928.19840.7936BLASTN-2247017.gbk
182269754229633026577Island text1.9533725.945446.7292-2269754.gbk
192414657244184627190Island text2.0175731.556622.0992BLASTN-2414657.gbk
202583500260275619257Island text3.1534424.868344.2502-2583500.gbk
212947000296459917600Island text1.7577824.379947.4053-2947000.gbk
223116000315909543096Island text6.68499e+1235.19450.982579-3116000.gbk