EuGI Island

Some Help

Go to Home Page

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_016458: Thielavia terrestris NRRL 8126 chromosome 2, complete sequence

NCBI: NC_016458

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
137050038927218773Island text1.7183246.400814.3562-370500.gbk
256750058886621367Island text1.6327545.088416.1378-567500.gbk
363013464859918466Island text1.6016923.787133.2684-630134.gbk
481819784809929903Island text2.2096358.325118.3481BLASTN-818197.gbk
51413500143319419695Island text1.4951428.815127.1653BLASTN-1413500.gbk
61792000180959917600Island text1.5751843.467311.9808-1792000.gbk
72150235218025830024Island text1.809253.912518.4097-2150235.gbk
82388975241809929125Island text1.2937831.450633.2927-2388975.gbk
92585587262159936013Island text1.9656262.717313.9309-2585587.gbk
103071338310000028663Island text1.8973963.257712.1983-3071338.gbk
114622500465582633327Island text2.0640744.68026.76696BLASTN-4622500.gbk
124980000500000020001Island text2.1385657.002324.8728-4980000.gbk
135245929530149955571Island text1.5957356.023521.1333BLASTN-5245929.gbk
145494415552778733373Island text1.8537361.735618.8952-5494415.gbk
156090839612609935261Island text1.5157855.778815.0962-6090839.gbk
166350000637366323664Island text1.9209854.297823.4446-6350000.gbk
176552254658109928846Island text1.9855352.641920.3476BLASTN-6552254.gbk
186587861660007312213Island text1.5768847.213810.7588-6587861.gbk
196688943*670000011058Island text1.8915754.34933.2553BLASTN+6688943.gbk
207397593743134133749Island text2.0871661.849316.5865BLASTN-7397593.gbk
217760000779255832559Island text1.8401941.041515.9825BLASTN-7760000.gbk
228014500803198417485Island text1.7356539.974526.9156BLASTN-8014500.gbk
238326000834409918100Island text1.9352950.735112.8032BLASTN-8326000.gbk
248451103847609924997Island text1.7590555.497519.9037BLASTN-8451103.gbk
258791150882609934950Island text1.6917750.07928.8281BLASTN-8791150.gbk
269092000911809926100Island text1.7727740.102120.0024-9092000.gbk
279439000947149932500Island text4.800263.019815.7936BLASTN-9439000.gbk