EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_016459: Thielavia terrestris NRRL 8126 chromosome 3, complete sequence

NCBI: NC_016459

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
132065634119420539Island text1.5482846.677410.0713-320656.gbk
245288147511822238Island text1.5218344.20612.5777-452881.gbk
352900055883829839Island text2.0414451.166420.6411-529000.gbk
468996371809928137Island text1.5803651.203810.4093-689963.gbk
576350078730123802Island text1.6564949.585711.53-763500.gbk
692322094259919380Island text2.1121645.434113.8202-923220.gbk
71183500120000016501Island text1.6388647.821429.489BLASTN-1183500.gbk
82179118220000020883Island text3.7889660.260325.3685BLASTN-2179118.gbk
92222000224409922100Island text1.6507948.293622.1068-2222000.gbk
102357000238328726288Island text2.1967846.702727.0587-2357000.gbk
112557941258983231892Island text2.5800546.907420.7969BLASTN-2557941.gbk
122741570276409922530Island text1.6908544.109113.1878BLASTN-2741570.gbk
132979997300909929103Island text1.7893630.654216.8352BLASTN-2979997.gbk
143149922317670026779Island text1.6487955.691420.7341-3149922.gbk
153388000341023922240Island text1.9268458.277816.1077BLASTN-3388000.gbk
163542324356513922816Island text3.1682857.869419.9896-3542324.gbk
173996500402659930100Island text1.7734549.949922.6884BLASTN-3996500.gbk