EuGI Island

Some Help

Go to Home Page

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_016520: Tetrapisispora phaffii CBS 4417 chromosome 1, complete genome

NCBI: NC_016520

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
117914520190622762Island text2.9051127.190624.1021BLASTN-179145.gbk
222425724559921343Island text1.6485820.9622.6147-224257.gbk
359448261959925118Island text1.5965319.942918.509-594482.gbk
477300080000027001Island text1.7073415.751115.1136BLASTN-773000.gbk
584947787255823082Island text1.4512314.317922.6093-849477.gbk
688700090025913260Island text1.5287515.620926.5806-887000.gbk
7948357*97091122555Island text1.7789415.935118.4716BLASTN+948357.gbk
81041662*106057218911Island text1.5161817.953622.2012-1041662.gbk
91066500108562519126Island text2.1452717.844118.5284BLASTN-1066500.gbk
101088022110088412863Island text1.6788320.380415.9997BLASTN-1088022.gbk
111165194119026325070Island text1.4892314.968418.7416BLASTN-1165194.gbk
121190702121359922898Island text1.8580416.353717.2626BLASTN-1190702.gbk
131238759126724028482Island text1.3658817.862418.6442BLASTN-1238759.gbk
141268975129209923125Island text1.4958218.29426.6659-1268975.gbk