EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020400: Plasmodium cynomolgi strain B DNA, chromosome 7, whole genome

NCBI: NC_020400

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1240004309919100Island text3.6221322.935333.4892-24000.gbk
2520007579023791Island text2.687922.604652.2171-52000.gbk
321651024020323694Island text2.4229227.779350.4072-216510.gbk
440450042209917600Island text1.6907830.079654.8301-404500.gbk
556600058809922100Island text2.0659230.350256.0574BLASTN+566000.gbk
668300070090517906Island text1.4343327.121835.0774-683000.gbk
777855580000021446Island text1.9699229.455452.9747-778555.gbk
886833088609917770Island text1.530225.23141.0342BLASTN-868330.gbk
989400091807724078Island text1.7232132.330151.097BLASTN-894000.gbk
1092600094430918310Island text1.5770827.504938.1289-926000.gbk
111143000117009927100Island text1.24806e+1238.32571.73834-1143000.gbk
121332000*135137119372Island text1.5023436.442135.0367-1332000.gbk