EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020406: Plasmodium cynomolgi strain B DNA, chromosome 13, whole genome

NCBI: NC_020406

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1362308409947870Island text1.7460821.57744.3571-36230.gbk
218415320321219060Island text1.8809532.365655.4666-184153.gbk
3208055*23623528181Island text3.2350731.985756.2005BLASTN-208055.gbk
444896647200723042Island text1.6816926.610746.0771-448966.gbk
558337560046417090Island text1.6000431.550952.1958BLASTN-583375.gbk
662900064903120032Island text2.0020927.301851.2364BLASTN-629000.gbk
767200069431722318Island text1.5314525.616141.6342-672000.gbk
885981188409924289Island text1.5627829.328852.5704-859811.gbk
91010000103382623827Island text2.117631.167947.4479-1010000.gbk
101074000109699923000Island text1.5570534.388740.7754-1074000.gbk
111311130133009918970Island text1.6600329.207250.2761-1311130.gbk
121407206*142609918894Island text1.8380928.293254.4687BLASTN+1407206.gbk
131466500*148409917600Island text1.6618425.559343.0686-1466500.gbk
141511500*153559924100Island text1.7137926.121348.3711-1511500.gbk
151842591186122018630Island text2.3387829.967253.5449-1842591.gbk
161885010190909924090Island text1.9556228.042245.8756-1885010.gbk