EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020407: Plasmodium cynomolgi strain B DNA, chromosome 14, whole genome

NCBI: NC_020407

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
116525219604930798Island text1.7813225.016941.9448-165252.gbk
224800027009922100Island text1.4950218.433936.0823-248000.gbk
334818836809919912Island text1.7075427.682750.9669-348188.gbk
455000057067620677Island text1.6320923.567239.5024-550000.gbk
556723859599928762Island text1.7277125.060849.9269-567238.gbk
672568975009924411Island text1.4448831.912723.6448-725689.gbk
785250087259920100Island text1.8436222.473443.2716BLASTN-852500.gbk
896200098059918600Island text2.0677231.069152.31BLASTN-962000.gbk
91012500*103209919600Island text1.7148524.019946.8681+1012500.gbk
101203516122576122246Island text1.6473226.840447.0451-1203516.gbk
111320309136024039932Island text1.5154422.894940.1511-1320309.gbk
121477500*150000022501Island text1.6405722.10441.2425-1477500.gbk
131555000157608121082Island text1.8326425.840245.539-1555000.gbk
141596515162474528231Island text1.5957522.227640.2668-1596515.gbk
151690388171809927712Island text1.5141532.484253.4292-1690388.gbk
161979282200192822647Island text1.5780329.857742.5082BLASTN-1979282.gbk
171996229202655430326Island text1.9054732.933748.1233BLASTN-1996229.gbk
182514000253571821719Island text3.3244531.267652.9541-2514000.gbk
192546000256809922100Island text1.739433.760954.0017-2546000.gbk
202810725283209921375Island text2.5382935.321239.0599BLASTN-2810725.gbk
212966500298915822659Island text4.9014224.798235.8481-2966500.gbk