EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_025260: Theileria orientalis strain Shintoku DNA, chromosome 1, complete

NCBI: NC_025260

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1176572*20000023429Island text1.6112235.238728.088BLASTN+176572.gbk
227329029977726488Island text1.684728.331725.338-273290.gbk
344799047942931440Island text2.4548543.898446.2242-447990.gbk
451956654165122086Island text1.9874238.620755.5029-519566.gbk
564570466806622363Island text2.2185848.140337.5252-645704.gbk
678080580143420630Island text2.3156343.226341.605BLASTN-780805.gbk
779282181775024930Island text2.1036537.609448.2664-792821.gbk
885989690003640141Island text1.7534534.876651.8882-859896.gbk
9920687*94089920213Island text2.3267348.150552.9614BLASTN+920687.gbk
101285947130000014054Island text1.4780337.57944.0858-1285947.gbk
111384359140000015642Island text1.6817635.797734.4683-1384359.gbk
121417421143673319313Island text2.4916726.024445.4014-1417421.gbk
131484319150099416676Island text1.7303327.13739.7308-1484319.gbk
141533531155890125371Island text2.0845645.662134.2496-1533531.gbk
151678000170100923010Island text2.404445.078452.6252-1678000.gbk
161704712173150626795Island text1.6521131.727339.9318-1704712.gbk
171759969180136441396Island text1.9969538.970838.7495-1759969.gbk
181850508187706626559Island text2.1121638.786439.309BLASTN-1850508.gbk
191911055193227821224Island text1.4484733.23254.5133-1911055.gbk
202062500208498922490Island text2.0505236.067440.1261-2062500.gbk
212091958211910727150Island text2.6223333.976847.0216-2091958.gbk
222259279227882119543Island text1.682129.939826.4466-2259279.gbk
232364322*239539531074Island text2.5873339.300546.8796BLASTN+2364322.gbk
242452977247610623130Island text1.7221329.456547.5636-2452977.gbk
252487658250029312636Island text1.7345832.850646.2884BLASTN-2487658.gbk
262532983256846535483Island text2.382326.003822.644-2532983.gbk
272625989265435528367Island text1.9998244.625742.9838-2625989.gbk