EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_025263: Theileria orientalis strain Shintoku DNA, chromosome 4, complete

NCBI: NC_025263

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
116076518137820614Island text1.671832.496419.4238-160765.gbk
229527832179726520Island text1.5249227.278127.6343-295278.gbk
339142141939927979Island text1.7708532.217740.9517BLASTN-391421.gbk
450853953409925561Island text2.1690141.390742.646-508539.gbk
571296273568122720Island text2.2356938.973353.2271-712962.gbk
675998678222122236Island text2.0392130.648153.0576-759986.gbk
793540096060925210Island text1.7478338.946932.1636BLASTN-935400.gbk
81221552124754225991Island text2.186829.11328.2251-1221552.gbk
91397373*142708729715Island text2.1818927.672146.5465BLASTN-1397373.gbk
101465626149053524910Island text1.80930.419336.827-1465626.gbk
111516806154020023395Island text1.7272736.349936.6579-1516806.gbk
121645159167150426346Island text3.0918650.869450.4791-1645159.gbk
131819903183900819106Island text1.6063827.264739.743-1819903.gbk
141975500*199704621547Island text2.6798629.050541.2687+1975500.gbk
152000063201951119449Island text3.5851527.727849.8538-2000063.gbk