EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_026743: Trypanosoma brucei gambiense DAL972 chromosome 10, complete

NCBI: NC_026743

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
161207*8509923893Island text1.7122628.663119.9388-61207.gbk
219780922059922791Island text1.5032334.934335.3393-197809.gbk
342400044644922450Island text1.585631.073751.9125-424000.gbk
456637158509918729Island text1.5119527.642735.989-566371.gbk
572850075309924600Island text1.6528635.526135.6203-728500.gbk
682541384809922687Island text2.1621328.544524.9178-825413.gbk
71038500105609917600Island text1.4886332.271448.4712-1038500.gbk
81102392*112741125020Island text1.4444437.366250.4385BLASTN-1102392.gbk
91675964169849922536Island text1.6604835.162354.0002BLASTN-1675964.gbk
101983500200000016501Island text1.5386531.671544.4126-1983500.gbk
112019687*204559925913Island text1.6107730.408650.571+2019687.gbk
122265500228441118912Island text1.5314932.934141.3296-2265500.gbk
132510000253209922100Island text1.4597736.314454.6169-2510000.gbk
142617009264075523747Island text1.4819831.809347.4114-2617009.gbk
152721352274014118790Island text1.481131.608720.1243+2721352.gbk
162967831299471626886Island text1.5988134.122211.3964-2967831.gbk
173227902325430426403Island text1.4971529.298410.592-3227902.gbk
183361897338419322297Island text1.4516737.925645.8278-3361897.gbk
193559537*358209922563Island text1.7454731.292649.1107-3559537.gbk