EuGI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NT_078267: Anopheles gambiae str. PEST chromosome 3L, whole genome shotgun

NCBI: NT_078267

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSBLASTNKey Word ConfirmationDownload Island
1981000100000019001Island text2.903535.71194.93818BLASTN-981000.gbk
22329000234759918600Island text4.8854935.64262.56426-2329000.gbk
32679500270281623317Island text1.8155735.875243.0473-2679500.gbk
43302403333309930697Island text1.9053336.767632.8567-3302403.gbk
53694000374109947100Island text1.8320134.110821.9375-3694000.gbk
65810500582809917600Island text1.6037333.271531.636-5810500.gbk
76447136647309925964Island text2.8359744.29893.26732-6447136.gbk
87146146716788221737Island text1.4725343.172423.389BLASTN-7146146.gbk
97926000794259916600Island text1.5506337.264232.6858-7926000.gbk
10133505721337359923028Island text1.6030439.300832.091BLASTN-13350572.gbk
11133830001340000017001Island text1.6052239.776434.0741BLASTN-13383000.gbk
12144456341447359927966Island text2.2713949.792732.5392-14445634.gbk
13146195001464659927100Island text2.519248.045126.4173-14619500.gbk
14182140001823681422815Island text1.4133236.326631.2827BLASTN-18214000.gbk
15185490001856959920600Island text1.562447.335327.2758-18549000.gbk
16199172601994730730048Island text1.9151842.514928.3048BLASTN-19917260.gbk
17199720001999926927270Island text1.3909137.645925.7461-19972000.gbk
18204480002048159933600Island text1.5688339.531533.7549-20448000.gbk
19206811692070176120593Island text1.8496441.067525.8185-20681169.gbk
20208238142085259928786Island text1.8243242.22431.0111-20823814.gbk
21209315002095352522026Island text1.5080231.193825.2771-20931500.gbk
22210825002110727624777Island text2.2715527.674644.9496BLASTN-21082500.gbk
23211095002112909919600Island text1.8071542.91425.399BLASTN-21109500.gbk
24216550002167409919100Island text1.5851343.335127.6389BLASTN-21655000.gbk
25226920002271809926100Island text1.6341541.713330.7346BLASTN-22692000.gbk
26238485002387533126832Island text4.1270741.81443.24252BLASTN-23848500.gbk
27240465002406709920600Island text1.6066632.384333.4172-24046500.gbk
28247285962475309924504Island text1.7298650.768137.5259-24728596.gbk
29263930002641259919600Island text1.6579341.545537.2652-26393000.gbk
30268820002690000018001Island text1.4948342.296931.1122-26882000.gbk
31283665002839849932000Island text2.1315645.66430.7243-28366500.gbk
3228425500*2844959924100Island text1.905345.221731.944BLASTN+28425500.gbk
33293885002940959921100Island text1.8053843.822223.3692-29388500.gbk
34301340003015609922100Island text1.430735.475435.6804-30134000.gbk
35304569483048009923152Island text1.6172335.922340.4008-30456948.gbk
3631025000*3105809933100Island text1.731143.016327.4219+31025000.gbk
37324165003243759921100Island text1.5857644.783633.6224-32416500.gbk
38328140003283659922600Island text1.5646243.173132.427BLASTN-32814000.gbk
39332640003328609922100Island text1.6441941.07732.1994-33264000.gbk
40338180003385435436355Island text1.726444.623729.885-33818000.gbk
41341120003413409922100Island text1.3801540.503436.7219-34112000.gbk
4234289446*3431059921154Island text1.5696527.22944.5921BLASTN+34289446.gbk
43345845003460000015501Island text1.768738.841839.2917BLASTN-34584500.gbk
44346147763465524440469Island text2.774437.594236.3747-34614776.gbk
45352346533525448819836Island text1.4710642.114535.5707-35234653.gbk
46356605003568560225103Island text1.9492344.367828.7764-35660500.gbk
47358360003585859922600Island text1.9933642.380510.5229-35836000.gbk
48374458753746809922225Island text1.3498636.472529.7235BLASTN-37445875.gbk
49378220003784409922100Island text1.381743.439922.9443-37822000.gbk
50381185003813759919100Island text1.5176643.395919.0584-38118500.gbk
51386960003872383127832Island text1.5062239.072336.83-38696000.gbk
52391860003920272016721Island text1.5172739.646226.3004-39186000.gbk
53397880003980959921600Island text1.857840.237723.1778-39788000.gbk
54401246794015959934921Island text1.8253841.52328.9938-40124679.gbk
55402870004030000013001Island text1.5792237.964528.5461BLASTN-40287000.gbk
56407467464076659919854Island text1.5496738.345128.6454-40746746.gbk
57411279784116613438157Island text1.6192544.155330.2263-41127978.gbk
58416235004164509921600Island text1.787844.498535.5355-41623500.gbk